ngs-tools

Next generation sequencing (NGS/HTS) command line tools.

Homepage POM file JAR file Javadoc

'org.nmdp.ngs:ngs-tools:1.4'

<dependency>
	<groupId>org.nmdp.ngs</groupId>
	<artifactId>ngs-tools</artifactId>
	<version>1.4</version>
</dependency>

<dependency org="org.nmdp.ngs" name="ngs-tools" rev="1.4"/>

"org.nmdp.ngs", "ngs-tools", "1.4"

Dependencies

Compile dependencies

com.google.code.findbugs » jsr305 » 2.0.3
com.google.guava » guava » 17.0
org.biojava » alignment » 1.9.1
org.biojava » core » 1.9.1
org.biojava » sequencing » 1.9.1
org.dishevelled » dsh-commandline » 1.0
org.dishevelled » dsh-compress » 1.0
org.nmdp.ngs » ngs-align » 1.4
org.nmdp.ngs » ngs-hml » 1.4
org.nmdp.ngs » ngs-reads » 1.4
org.nmdp.ngs » ngs-variant » 1.4

Test dependencies

junit » junit » 4.11