ADAM: Core

A fast, scalable genome analysis system

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'org.bdgenomics.adam:adam-core:0.15.0'

<dependency>
	<groupId>org.bdgenomics.adam</groupId>
	<artifactId>adam-core</artifactId>
	<version>0.15.0</version>
</dependency>

<dependency org="org.bdgenomics.adam" name="adam-core" rev="0.15.0"/>

"org.bdgenomics.adam", "adam-core", "0.15.0"

Dependencies

Compile dependencies

com.esotericsoftware.kryo » kryo » 2.21
com.netflix.servo » servo-core » 0.5.5
com.twitter » parquet-avro » 1.6.0rc4
commons-io » commons-io » 1.3.2
it.unimi.dsi » fastutil » 6.4.4
org.apache.avro » avro » 1.7.6
org.apache.httpcomponents » httpclient » 4.3.2
org.bdgenomics.bdg-formats » bdg-formats » 0.4.0
org.scala-lang » scala-library » 2.10.4
org.scoverage » scalac-scoverage-plugin_2.10 » 0.99.2
org.seqdoop » cofoja » 1.1-r150
org.seqdoop » hadoop-bam » 7.0.0
org.seqdoop » htsjdk » 1.118
org.slf4j » slf4j-log4j12 » 1.7.5

Provided dependencies

com.amazonaws » aws-java-sdk » 1.7.5
org.apache.hadoop » hadoop-client » 2.2.0
org.apache.spark » spark-core_2.10 » 1.1.0

Test dependencies

org.scalatest » scalatest_2.10 » 2.2.2